Too complex diagram?

[Note that you input has some small bugs:

Warning: node el2, port port133 unrecognized
Warning: node el2, port port15 unrecognized
Warning: node el2, port port13 unrecognized
Warning: node el2, port port132 unrecognized
Warning: node el2, port port32 unrecognized
Warning: node el2, port port30Adv unrecognized
Warning: node el2, port port36 unrecognized
Error: twoBigNodes0.gv: syntax error in line 246 near '}'

]
Here is a somewhat re-arranged version.

Arguably a bit better.
(I tried adding ranking to put node el4 between the two big nodes, but it was a disaster)
If there are ways to subset the edges, you might look at the layers capabilities (FAQ | Graphviz and Getting layers to work with SVG). This would allow you to show just a subset of the edges at any one time.

digraph g {
   //overlap=false     // does not apply to dot
   //margin="10"       // does not help (me)
   //esep=1.3          // does not apply to dot    
	graph [layout=dot,
		nodesep=1,
		rankdir=LR,
		ranksep=9,
		splines=true
	];
	node [XXXheight=.1,
		shape=record
	];
	edge [colorscheme=paired12,
		penwidth=3
	];
	el4	[label="el4 |{{
                 <port1>  port1 
                |<port2>  port2 
                }|{
                <port3> port3
                |<\
port4> port4
                |<port5> port5
                |<port6> port6
                |<port7> port7
                |<port8> \
port8
                |<port9> port9
                |<port10>port10}} "];
	El1	[label="El1 | {{
                    <port54> port54
                    | <port55> port55
                    | <port56> port56
                    | <\
port57> port57
                    | <port58> port58
                    | <port59> port59
                    | <port60> port60
                    | <\
port61> port61
                    | <port62> port62
                    | <port63> port63
                    | <port64> port64
                    | <\
port65> port65
                    | <port66> port66
                    | <port67> port67
                    | <port68> port68
                    | <\
port69> port69
                    | <port70> port70
                    | <port71> port71
                    }|{ 
                      <\
port11> port11
                    | <port12> port12 
                    | <port13> port13
                    | <port14> port14
                    | <\
port15> port15
                    | <port16> port16
                    | <port17> port17
                    | <port18> port18
                    | <\
port19> port19
                    | <port20> port20
                    | <port21> port21
                    | <port22> port22
                    | <\
port23> port23
                    | <port24> port24
                    | <port25> port25 
                    | <port26> port26
                    | <\
port27> port27
                    | <port28> port28
                    | <port29> port29
                    | <port30> port30
                    | <\
port31> port31
                    | <port32> port32
                    | <port33> port33
                    | <port34> port34
                    | <\
port35> port35
                    | <port36> port36
                    | <port37> port37
                    | <port38> port38
                    | <\
port39> port39
                    | <port40> port40
                    | <port41> port41
                    | <port42> port42
                    | <\
port43> port43
                    | <port44> port44
                    | <port45> port45
                    | <port46> port46
                    | <\
port47> port47
                    | <port48> port48
                    | <port49> port49
                    | <port50> port50
                    | <\
port51> port51
                    | <port52> port52
                    | <port53> port53
                } }"];
	el4:port10 -> El1:port15	[color=1,
		taillabel="Consumer:['']"];
	el4:port7 -> El1:port13	[color=2,
		taillabel="Consumer:['', '']"];
	el4:port5 -> El1:port12	[color=3,
		taillabel="Consumer:['']"];
	el4:port8 -> El1:port14	[color=4,
		taillabel="Consumer:['']"];
	el4:port4 -> El1:port11	[color=5,
		taillabel="Consumer:['', '']"];
	el4:port3 -> El1:port17	[color=6,
		taillabel="Consumer:['']"];
	el3	[label="el3 |{{
        <port91> port91
        | <port92> port92
        | <port93> port93
        | <port94> port94
        | <port95> \
port95
        | <port96> port96
        | <port97> port97
        | <port98> port98
        | <port99> port99
        | <port100> \
port100
        | <port101> port101
        | <port102> port102
        | <port103> port103
        | <port104> port104
        | <\
port105> port105
        | <port106> port106
        | <port107> port107
        | <port108> port108
        | <port109> port109
        | <\
port110> port110
        | <port111> port111
        | <port112> port112
        | <port113> port113
        | <port114> port114
        | <\
port115> port115
        | <port116> port116
        | <port117> port117
        | <port118> port118
        | <port119> port119
        | <\
port120> port120
        | <port121> port121
        | <port122> port122
        | <port123> port123
        | <port124> port124
        | <\
port125> port125
        | <port126> port126
        | <port127> port127
        | <port128> port128
        | <port129> port129
        | <\
port129> port129
        | <port130> port130
        | <port131> port131
    }|{
          <port72> port72
        | <port73> port73
        | <\
port74> port74
        | <port75> port75
        | <port76> port76
        | <port77> port77
        | <port78> port78
        | <\
port79> port79
        | <port80> port80
        | <port81> port81
        | <port82> port82
        | <port83> port83
        | <\
port84> port84
        | <port85> port85
        | <port86> port86
        | <port87> port87
        | <port13> port13
        | <\
port88> port88
        | <port89> port89
        | <port90> port90
    } } "];
	el4:port7 -> el3:port13	[color=7,
		taillabel="Consumer:['']"];
	el4:port6 -> el3:port87	[color=8,
		taillabel="Consumer:['']"];
	el4:port9 -> el2:port133	[color=9,
		taillabel="Consumer:['']"];
	el4:port10 -> el2:port15	[color=10,
		taillabel="Consumer:['']"];
	el4:port7 -> el2:port13	[color=1,
		taillabel="Consumer:['']"];
	El1:port54 -> el3:port75	[color=2,
		taillabel="Consumer:['', '', '']"];
	El1:port69 -> el3:port74	[color=3,
		taillabel="Consumer:['', '', '']"];
	El1:port66 -> el3:port82	[color=4,
		taillabel="Consumer:['', '']"];
	El1:port57 -> el3:port85	[color=5,
		taillabel="Consumer:['']"];
	El1:port67 -> el3:port86	[color=6,
		taillabel="Consumer:['']"];
	El1:port64 -> el3:port80	[color=7,
		taillabel="Consumer:['']"];
	El1:port65 -> el3:port81	[color=8,
		taillabel="Consumer:['']"];
	El1:port63 -> el3:port79	[color=9,
		taillabel="Consumer:['']"];
	El1:port56 -> el3:port76	[color=10,
		taillabel="Consumer:['']"];
	El1:port62 -> el3:port78	[color=1,
		taillabel="Consumer:['']"];
	El1:port58 -> el3:port77	[color=2,
		taillabel="Consumer:['', '']"];
	El1:port68 -> el3:port73	[color=3,
		taillabel="Consumer:['', '']"];
	El1:port71 -> el3:port84	[color=4,
		taillabel="Consumer:['']"];
	El1:port70 -> el3:port83	[color=5,
		taillabel="Consumer:['']"];
	El1:port55 -> el3:port72	[color=6,
		taillabel="Consumer:['', '']"];
	El1:port60 -> el3:port89	[color=7,
		taillabel="Consumer:['']"];
	El1:port61 -> el3:port90	[color=8,
		taillabel="Consumer:['']"];
	El1:port59 -> el3:port88	[color=9,
		taillabel="Consumer:['']"];
	el3:port125 -> el4:port2	[color=10,
		taillabel="Consumer:['', '']"];
	el3:port129 -> el4:port1	[color=1,
		taillabel="Consumer:['']"];
	el3:port115 -> El1:port35	[color=2,
		taillabel="Consumer:['']"];
	el3:port101 -> El1:port23	[color=3,
		taillabel="Consumer:['']"];
	el3:port112 -> El1:port32	[color=4,
		taillabel="Consumer:[''"];
	el3:port114 -> El1:port34	[color=5,
		taillabel="Consumer:[''"];
	el3:port109 -> El1:port30	[color=6,
		taillabel="Consumer:[''"];
	el3:port106 -> El1:port28	[color=7,
		taillabel="Consumer:[''"];
	el3:port111 -> El1:port31	[color=8,
		taillabel="Consumer:[''"];
	el3:port104 -> El1:port26	[color=9,
		taillabel="Consumer:[''"];
	el3:port105 -> El1:port27	[color=10,
		taillabel="Consumer:[''"];
	el3:port102 -> El1:port24	[color=1,
		taillabel="Consumer:[''"];
	el3:port108 -> El1:port29	[color=2,
		taillabel="Consumer:[''"];
	el3:port116 -> El1:port47	[color=3,
		taillabel="Consumer:[''"];
	el3:port113 -> El1:port33	[color=4,
		taillabel="Consumer:['']"];
	el3:port103 -> El1:port25	[color=5,
		taillabel="Consumer:['']"];
	el3:port124 -> El1:port37	[color=6,
		taillabel="Consumer:['']"];
	el3:port117 -> El1:port36	[color=7,
		taillabel="Consumer:['']"];
	el3:port127 -> El1:port38	[color=8,
		taillabel="Consumer:['']"];
	el3:port128 -> El1:port39	[color=9,
		taillabel="Consumer:['']"];
	el3:port123 -> El1:port53	[color=10,
		taillabel="Consumer:['']"];
	el3:port118 -> El1:port18	[color=1,
		taillabel="Consumer:['']"];
	el3:port122 -> El1:port22	[color=2,
		taillabel="Consumer:['']"];
	el3:port119 -> El1:port19	[color=3,
		taillabel="Consumer:['']"];
	el3:port121 -> El1:port21	[color=4,
		taillabel="Consumer:['']"];
	el3:port120 -> El1:port20	[color=5,
		taillabel="Consumer:['']"];
	el3:port131 -> El1:port42	[color=6,
		taillabel="Consumer:['']"];
	el3:port130 -> El1:port41	[color=7,
		taillabel="Consumer:['']"];
	el3:port91 -> El1:port40	[color=8,
		taillabel="Consumer:['']"];
	el3:port96 -> El1:port48	[color=9,
		taillabel="Consumer:['']"];
	el3:port95 -> El1:port46	[color=10,
		taillabel="Consumer:['']"];
	el3:port100 -> El1:port52	[color=1,
		taillabel="Consumer:['']"];
	el3:port94 -> El1:port45	[color=2,
		taillabel="Consumer:['']"];
	el3:port97 -> El1:port49	[color=3,
		taillabel="Consumer:['']"];
	el3:port93 -> El1:port44	[color=4,
		taillabel="Consumer:['']"];
	el3:port92 -> El1:port43	[color=5,
		taillabel="Consumer:['']"];
	el3:port99 -> El1:port51	[color=6,
		taillabel="Consumer:['']"];
	el3:port98 -> El1:port50	[color=7,
		taillabel="Consumer:['']"];
	el3:port126 -> El1:port16	[color=8,
		taillabel="Consumer:['']"];
	el3:port107 -> el2:port132	[color=9,
		taillabel="Consumer:['']"];
	el3:port112 -> el2:port32	[color=10,
		taillabel="Consumer:['', '']"];
	el3:port110 -> el2:port30Adv	[color=1,
		taillabel="Consumer:['']"];
	el3:port117 -> el2:port36	[color=2,
		taillabel="Consumer:['']"];
	El2	[label="el2 | {{
                    <port13>port13
                    | <port133> port133
                    | <port15> port15
                    | <\
port30Adv> port30Adv
                    | <port32> port32
                    | <port132> port132
                    | <port36> \
port36
                    }|{}} "];
}

Giving: